PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G193900.2.p
Common NamePRUPE_ppa003350mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 574aa    MW: 62274.1 Da    PI: 6.4375
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G193900.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH283.9e-09397444455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Prupe.8G193900.2.p 397 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 444
                         8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.33E-17391462IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.81E-10391448No hitNo description
PROSITE profilePS5088815.663393443IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-16393461IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.2E-6397444IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10399449IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 574 aa     Download sequence    Send to blast
MENEFFLNAG IPPPLHFEQT SSMPAWRSSF STAMDIQATA TADRNCSSEQ SPDCFYNPNW  60
DKSADQNIHF ESALSSMVSS PAASNSNISN ESFVIRELIG KLGNIGSSGE ISPHSQSLLG  120
IQANTYMGRN GNGNGNASTN TSCYSTPLNS PPKLSLPIMD HHLKKEKLPN MGKPMPLNSS  180
VAEFSADPGF AERAAKFSCF GSRSFNGRTT QLGMNNNSSS NNNTELPYRS NAIMGNGKLP  240
RVSSSPALKA LGSQTGLQEK MNSLLQDRNE LPISREESTL SEQNPNGETG LVASNSMDLN  300
SRKRKSVSKG KAKEPPPISS PSPIATKGAE LNDNSNAKRS KPNENNGNDQ NGSVKAEEDT  360
KGSTSSDEKQ TKTGAKPPEP PKDYIHVRAR RGQATDSHSL AERVRREKIS ERMKLLQDLV  420
PGCNKVTGKA LMLDEIINYV QSLQRQVEFL SMKLASVNTR LDFNMDALMS KEIFQQNNSL  480
PQHPIFPLDS SAQAIYGHQR QQNPALQNNI SNGAVDPLDT SLCQSLGMQL PPLSGFSSEG  540
IPQFPAFGED DLQTIVQMGY GQNPNRETEL DGE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1300305SRKRKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007201182.10.0hypothetical protein PRUPE_ppa003350mg
TrEMBLM5VNC00.0M5VNC0_PRUPE; Uncharacterized protein
STRINGGLYMA08G46040.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.11e-111bHLH family protein